YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|7494218
Protein type: Globular with Signal Peptide
Type Confidence: 0.50
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTILLTLFII YVCLIGHLTK VYIKENISNQ KKNPLNFIRR KHNNTKKNRK LSFNINKNIN  60
   61 HCKRIVKVEP FFIHKNVRRY VYRRSCFIFN IWNSSKVIKD IYKYIDSCTS FLRKFKSLPS 120
  121 IINVENKKYG KLEKRKKEKN DLCPNIFITY SSNNVPRNIS NKLEHFIYKQ KDIPKEQNIL 180
  181 TYDFFKRDEE LLNDQNRNDF IKKYYNPSYH CDEHPFEHIY NIKDMEHIYD KSIINYIYDL 240
  241 KRKEEIEYIR KFNRSHYLNS YLLIYPPPNL SGNLHAGHFF NFIHQHIFFL YNKYIMGKYA 300
  301 IPFFGFDHGG LSAHEMFAKH MRGEELGREK YINEIKKWQE NLKENMLKDL QNMNITYNEK 360
  361 MLFNTMDKGM IDLINKAFYI LYKNNMIINR LYPVYYCKEL KTAIPKMDIQ FKNAENKDIY 420
  421 NLKCYLVKNK NKIDNIYDDK KCIATKNEND HNMNNNDITY CSNNPPKNVT NKNDDTYEKI 480
  481 NFFEKNNMSS NCICGDFTIT NNDDKYEEKK KKIKNMIEEY DCKEIKFFEK KKFPYYYLNE 540
  541 EELKNKALIN VSKYIYINIE NIEDINNIVA ILYYSSNKKK YENMYALLPH SNVIIPLIFH 600
  601 KKKNFPSLIS GNKKGEEREE IKDSKEIKER EEIKEREEIK DSKESKERDD NNNNIDDDDD 660
  661 DIFLPVYSLE KKHDYSFNIN KEKGTSQLFF NVSHGKKEHM TYNINNDEKE KENNLINIIN 720
  721 CRKKDKELKF AYYKNYKCTL ILSEHLCIKY DELCNMYYNN SGNKNFNILP CNRKNYFLEN 780
  781 YETHPKDWIL NRQIWYGHTI PLFKYEHFVT KEESKEGYED IEKKNKIINK NNNNDKNNNN 840
  841 NNDKNNNNND KNNNNNDNNK NIIIADHFNC FVYGKNVDEA YENLIKSNLF KKECIKKEYL 900
  901 KNDDILDSWF SSCLYFLHCL NSNNIDIYDL LKKKKSLVDF TCTGQDILYP WILRSFILLN 960
  961 YFIENDYLNE LLPSKDNYDI VHILQGLKKE KDNKYLSTSI LSKTVKFHGI LKDDVGKKIS1020
 1021 KSDENSTYYK KYLEDINMDT LRLSFTFLQK NVEDIVWSKN NIYKSEKFIK KFWNVGQFIK1080
 1081 QNCNYESYIR MSKVILANTN NINIENIDDD SIDGDCIDDN IKVLEFLKTK TQHISCISIF1140
 1141 EAYYYTIHLI LQYMKLYNLN KSIILINDFI MNYFSKFFLN YYSSGKSQIS NFLIYYIFKG1200
 1201 LIKFLYPFIP HICEILYIQI FFKEKEKKQI LNASSPPMLL YENYKFFPNQ KFSLEPKIQS1260
 1261 VVSDHFLTFM EIYNFLRKFK KENKETICNN NTLYLYIKQK KGAELTLLYF KNEEHMLKRA1320
 1321 FHMNIIFNAC EKNKLGYSFL NEKEHIQRLN TRKVIYDCDR FVVLAQV

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle