YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|4494021, gi\|1...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.86
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKIHYINILL FELPLNILIY NQRNHYITRT PKATTRTLCE CELYAPSNYD SDPEMKRVMQ  60
   61 QFVDRTTQRF HEYDERMKTT RQKCKEQCDK EIQKIILKDK LEKQMAQQLT TLDPNITTED 120
  121 IPTCICEKSL ADKTEKFCLN CGKTMGGVAP GWGLVSGLGY VGWTNYVTQT ALQKGIEAGV 180
  181 KAGIEELKGF PGLRKLIKVS QIQSFINPAN YAEETTYFNF IKQVENTKCV VKEHTFCYST 240
  241 YISKENALSQ RASEIAKNAA DMAKLAEREV LDKAAPVTSG LNTAIIASIV AILVIVLVMI 300
  301 IIYLFLRYRK NKKMKKKLQY IKLLEE

Type	Start	End	Confidence
Non-Cytoplasmic	1	283	0.86
Transmembrane Helix	284	306	0.95
Cytoplasmic	307	326	0.97