YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|124505671, gi...
Protein type:	Transmembrane
Type Confidence:	0.95
Topology Confidence:	0.90
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKDHYINILL FALPLNILVY NQRNYYITPR HTETNRSLCE CELYSPTNYD SDPEMKRVMQ  60
   61 QFVDRTTQRF HEYDERMKTT RQKCREQCDK EIQKIILKDK IEKELAQQLT TLETNITTKD 120
  121 IPTCVCEKSL ADKVEKTCLK CGGVLGGGIA PSVGILGGIG EAIMSAWKVA ALKAATEYAL 180
  181 TEGAAKGAIA GNAQGMEVVI NFLKYWGVNE FFSEIFESIL KISHYSKVKD FADAIITKKA 240
  241 QICADGLLKN PAMCRKIDIK FGLSDEYGTP IAGPPNIEIP QKISGLVEQA DQAAVEVAKD 300
  301 TSQSVAAKIT EEQTAVINAT YTSWQIAITA SVIAIVVIVL IMVIIYLILR YRRKKKMKKK 360
  361 LQYIKLLEE

Type	Start	End	Confidence
Non-Cytoplasmic	1	325	0.90
Transmembrane Helix	326	349	0.94
Cytoplasmic	350	369	0.97