YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	INSI1_CRIGR
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.88
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPRLHDHVWS CSGSGAARPH SLPRGMIAAA RCPQGSGAPE PAPRSPRAGT AGCGARPGSW  60
   61 HHDLVQRSLV LFSFGVVLAL VLNLLQIQRN VTLFPDEVIA TIFSSAWWVP PCCGTAAAVV 120
  121 GLLYPCIDSH LGEPHKFKRE WASVMRCIAV FVGINHASAK LDFANNVQLS LTLAALSLGL 180
  181 WWTFDRSRSG LGLGITIAFL ATLITQFLVY NGVYQYTSPD FLYIRSWLPC IFFSGGVTVG 240
  241 NIGRQLAMGV PEKPHSD

Type	Start	End	Confidence
Cytoplasmic	1	67	0.96
Transmembrane Helix	68	87	0.94
Non-Cytoplasmic	88	105	0.88
Transmembrane Helix	106	127	0.92
Cytoplasmic	128	141	0.89
Transmembrane Helix	142	159	0.91
Non-Cytoplasmic	160	166	0.73
Transmembrane Helix	167	184	0.93
Cytoplasmic	185	190	0.86
Transmembrane Helix	191	210	0.94
Non-Cytoplasmic	211	222	0.78
Transmembrane Helix	223	243	0.90
Cytoplasmic	244	257	0.88