YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|238014248, gi...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.96
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAGGPAAVSF LTNIAKVAAG LGAAASLASA SLYTVDGGER AVIFDRFRGV LPETVGEGTH  60
   61 FLVPWLQKPF IFDIRTRPHN FSSNSGTKDL QMVNLTLRLL SRPDVQHLPT IFTSLGLEYD 120
  121 DKVLPSIGNE VLKAVVAQFN ADQLLTDRPH VSALVRDALI RRAREFNIIL DDVAITHLSY 180
  181 GIEFSLAVEK KQVAQQEAER SKFLVAKAEQ ERRAAIVRAE GESESARLIS EATAMAGTGL 240
  241 IELRRIEAAK EIAAELARSP NVAYIPSGEN GKMLLGLNAT GFGR

Type	Start	End	Confidence
Signal Peptide	1	30	0.95
N-region	1	21
H-region	22	27
C-region	28	30
Cleavage Site	30	31
Non-Cytoplasmic	31	284	0.99