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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|113594729, gi...
Protein type: Transmembrane
Type Confidence: 0.81
Topology Confidence: 0.69
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRRSGNGGAA KKKKKRSASA ASERRPRADG GMRIVVPLQG VVQGRGGLVL GSLIPCALFY  60
   61 FFQLYIKRNR ASPPPPPGSP TAASAAAVSP IHRSLSRGLL APRAALPAIS ARGASVRDDD 120
  121 SLYYAGLRRC AADPYHPVTN PSGIIQLGLA ENYLSLDLVG RWMEEHAAEA ASMAGGEDED 180
  181 ERELSIRGLA AYQPYDGILA LKMALAGFMR QIMQGSVSFE PSQVVITSGA TPAMEILSFC 240
  241 LADPGNAFLV PSPYYPGWDR DIKWRTGIEL IPVPCRSTDN FNISITALEI AYNQAKKRGI 300
  301 KVRGVLISNP NNPTGSFVPK QTLHDLLEFA AEKNIHLISD EVFAGSTYGS GKFVSVAEVV 360
  361 DDLEDFDKGR VHIIYGLSKD LSLAGFRVGV IYSYNESIVT AAAKIARFSS VSTPTQRLLV 420
  421 AMLSDQKFIS DYLKVNRERL RKMYHLFVDA LDQVGIECYK SSGGFYCWAD MSKFIRSYSE 480
  481 KGERKLWDRL LEEAKVNVTP GSSCHCIEPG WFRCCFTTLS EHDIPVLVQR LRTITDSHKP 540
  541 NH

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle