YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|67875428, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.49
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFVLEGILHV DIEVFMLIFV RMTGLFVIAP IFGSRNIPTY CKIGFSFMTA LILVNTIKVQ  60
   61 ELYFSNIYEY FILVLKEFLV GITLGYVAYM IFTAIYVAGQ FIDMQIGFGV VNVIDPLNST 120
  121 QVSITSNFYF LLCMLVFLIC RGHYILIRAL FASYNYIPVG TGVFGEDMVN DIVRVFGNIF 180
  181 LIAFKISAPI TISIMISEVA LGIVSKTVPQ LNVFMVGMPL KIILGLAVMV ITIPMFLNLV 240
  241 ENLITGIDNE MHIFLKDMAP K

Type	Start	End	Confidence
Cytoplasmic	1	11	0.69
Transmembrane Helix	12	33	0.87
Non-Cytoplasmic	34	38	0.65
Transmembrane Helix	39	59	0.80
Cytoplasmic	60	77	0.73
Transmembrane Helix	78	99	0.89
Non-Cytoplasmic	100	121	0.73
Transmembrane Helix	122	145	0.80
Cytoplasmic	146	180	0.52
Transmembrane Helix	181	204	0.80
Non-Cytoplasmic	205	216	0.46
Transmembrane Helix	217	240	0.81
Cytoplasmic	241	261	0.49