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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|48859207, gi|...
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.66
Topology Confidence: 0.38
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKVKCFGINL CVFSLLLIFC QVVYAKTDTI IYETELYGPP FKFIEDGEIS GFEIELNQYI  60
   61 FSGSEYRFDY RFNTWEKVYE KLKNGEIDTC GLLVVNEERK KDILFSDTVM NIYISIYSKE 120
  121 KNKNIGIKDL EKYRVGVGKE QYSEHILKDS VGISNYTTFV DVEEAIDALN EGKIDVIFEN 180
  181 QDVVNHYLIK KGLTGKIIPH KTELFPVKVA YGVSKRNPEL VKYINERLDS VKKNGIYEQL 240
  241 YRKHFLRPSD FYRRKQRIRN FAAMLALLVL LALLQVYIRH LKKKISKAYR ELRKQHEWLR 300
  301 ITLSSIGEAV ITTDENGTVT FSNYEIQKML GLSEEEILGK KLDKLLSGLV DKREKVYKIP 360
  361 IEEVVNRGSM IKLETDLSLV TPGGRRLVEG TVAPIRNDSD VIIGTVVALK DITEIKKKDE 420
  421 ILYNMEYYDP LTGLPNRSLF SDRLKMALAQ SKRNNEMCAL IILDLDNFKA INDTLGHSVG 480
  481 DMLLKQVAEK IKGYLREVDT VARIGGDEFI IIQPQIKDIN DATRAADRIL KKFQQPWILE 540
  541 GKEYYITASM GIGIYPNGGE DPQTIFKNAD TALYRAKELG RNNYQLYTES MNQKVLQRLD 600
  601 IENSLRRAIE KEEFVLFYQP QIDIKTGKIV GFEALLRWYH PDYGLMPPME FIPVAEDSGL 660
  661 IVVIGEWVLE TACRQNKKWI ECGLEPHLIS VNLSARQFQR SNIVEVIDRI RSSTGLAPEL 720
  721 LELEITESTA MQDLSFTIDV LNQLRKKGIR VSLDDFGTGY SSLNYLRQLP IDTLKIDKSF 780
  781 VQDIRANSKE EAIAKTVISL AHKLDLTVVA EGVETKEQLL FLKKEKCDKA QGYLFSKPLP 840
  841 AEEIEKMLRD KKCFVIGEEV DN

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle