YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	PRS40_RAT
Protein type:	Globular with Signal Peptide
Type Confidence:	0.96
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MWGSRAQQSG PDRGRTCLLA VLLLSFSLFQ LHAQDYKPSQ TPPPTSDALL KPMGRVQKEI  60
   61 CGKTKFQGKI YGGSIAKAER WPWQASLIFR GRHICGAVLI DKNWVASAAH CFKRSLKPSD 120
  121 YRILLGYNEL SNPSNYSRQM TLSKVIVHED YNKLHSQEKD IVLIQLHLPV RYSSHIFPVC 180
  181 VPDQTTKEPS DESCWISGWG MVTDDKFLQA PFPLLDSEVF LMNDQECEAF FQTPQISITE 240
  241 YDAIKDDMIC AGDITNQKST CRGDSGGPLV CLLDSYWYLV GLASWSGACL EPIHSPSIFT 300
  301 RVSHFSDWIE KKKADTPDVD PSLAPLEETA PSLIGWRNYS AGTTLEPRIC TTLLSSQVLL 360
  361 LQSIWLRIL

Type	Start	End	Confidence
Signal Peptide	1	33	0.99
N-region	1	24
H-region	25	30
C-region	31	33
Cleavage Site	33	34
Non-Cytoplasmic	34	369	0.99