YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|49256361, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.98
Topology Confidence:	0.85
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSRFLAVLRS WLMMVSIIAA GNTFQSFRDH SFLSDKLYTG SPDLVNGLQA RTFGVWTLLS  60
   61 SVIRCACAVD IQNKTLYHLT LWTFILALGH FLAEVFVYHT AEMSIGIMAP LMVASFSIFG 120
  121 MLIGYQYLEV QQESSISHNK KKN

Type	Start	End	Confidence
Cytoplasmic	1	6	0.91
Transmembrane Helix	7	27	0.88
Non-Cytoplasmic	28	47	0.92
Transmembrane Helix	48	68	0.85
Cytoplasmic	69	75	0.83
Transmembrane Helix	76	98	0.87
Non-Cytoplasmic	99	104	0.77
Transmembrane Helix	105	128	0.89
Cytoplasmic	129	143	0.92