YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|48734663, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.56
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTFQWTAVAS FLYGEVAVLL ILCIPFISPL RWRKIFRFQL WSKVSPYWNK AFLSIIVVLI  60
   61 VLFLDAAREV RKYSASNLTD KNAKLYPSSY DLIHMKLFRS QRNLYISGFS LFFWLVLRRV 120
  121 VSLIMELASE IEGNGAMQTQ VENANEAAKK YMEENEQLHK TINNAKMDEG KWALKADNEK 180
  181 LKTEVENLKE ELKRMTDALS KSQKDASALK KQCDGLTREY DHLLREHEKL QNTTDGMQNK 240
  241 KDE

Type	Start	End	Confidence
Non-Cytoplasmic	1	6	0.77
Transmembrane Helix	7	30	0.86
Cytoplasmic	31	46	0.76
Transmembrane Helix	47	67	0.91
Non-Cytoplasmic	68	102	0.76
Transmembrane Helix	103	121	0.63
Cytoplasmic	122	243	0.56