YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|48851277, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.91
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFTSSQLLKS SGHKGEPDME WMLMPYRRYA DFSGRSRRKE YWMFMLFSVI VTMVCVTLLV  60
   61 AGGMSIDENG ESTPGPLFWV GVVAMTVWGL GSIIPSIAVQ VRRFHDQDKS GWMVLLGLIP 120
  121 YVGGLIVFIF MCLEGTRGPN RYGEDPKNPV GYDVFA

Type	Start	End	Confidence
Cytoplasmic	1	41	0.99
Transmembrane Helix	42	64	0.92
Non-Cytoplasmic	65	76	0.88
Transmembrane Helix	77	99	0.91
Cytoplasmic	100	110	0.90
Transmembrane Helix	111	133	0.92
Non-Cytoplasmic	134	156	0.98