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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|78195532, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.35
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGLAEKSDKI LRYLPSPKKQ LLALLLIVFV IELFLMVLLP RTADGGTPLA ISLLDALLLV  60
   61 ILSAPIIWLS IVRPLRSVAF TASLHTDLLL DHIADGIISF DGAGRLLSLN PAAEQLFGYQ 120
  121 SAEATGRSLG DILAIRSTGK DNPLLTPLVC CGEEHSRLTC EAEGIRSDGS RFPAALSLSR 180
  181 VQMKGVWHFL GIVRDVTESR ETGERLRETN EKLDTLIQAS PQGIVAVDCG GKVTLWNRAA 240
  241 VEIFGWSAEE VLGKPYPVAP AERAAEHRKL RELVLQGKRI TDVELRRRRK DGSPIDVSLS 300
  301 AAPICDGSGT PLGVITIISD ISARKRNEQE LVLLKRAMES SINGITITDA THPDNPIIYV 360
  361 NPAFERITGY GVDEVIDKNP RFLRGDDRDQ AELKKLVQAF KEEREGCFVL RNYRKDGSPF 420
  421 WNELFIAPVR DRDGVVTNYI GVMNDITEHR RYEEQLVYQA THDPLTGLPN RNLLQDRLGQ 480
  481 ALALEAFRRR NPICVMFLDL DNFKKVNDTL GHTVGDMLLK AVANRLKNCL RGGDTVARLG 540
  541 GDEYIIVLPN VREVPDVITV AKKMINVFAA PLLLMGNEIY VTASIGIALF PTDGETVDAL 600
  601 LKNADAAMYH AKEQGKNNYQ FYSAEMNIRV FERLSLETSL HRAVKNQEFL LHYQPRVDLR 660
  661 NGRICGVEAL VRWNHPEMGL VSPAKFIPLA EETGLIVPMG EWVLRTACAQ NKAWQDAGLP 720
  721 PLRMAVNLSA RQFRQENLIA MVEEILMETG LAPQWLELEL TESLVMQEAE KSAAILRELT 780
  781 DRGIEVAIDD FGTGYSSLSY LKRFPIANLK IDQAFIRDMT RDPDDATLVK TIITMAHGLG 840
  841 MKTIAEGVEL AEQIDFLCRH QCEEMQGYYF SRPITAEELG RLLADGKTLD LSPVNVDPRD 900
  901 RIRAV

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle