YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|73670238, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.95
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKGTRVILGF FAIIALIFVA YAVLRTIPLN DCGDNGTGLN CIELPPGFSI DYYAENIEGA  60
   61 RSMALSPNGT IFVGSRDTGK VYAVLDRNND SKADEVLVLA EGLDMPNGVA FRNGSLYVAE 120
  121 VSRVIRYDDI EARLENPPEP IVVNDNFPSD RSHGWKYIKF GPDGKLYVPV GMPCNVCNKE 180
  181 GEDERYGTIM RMEPDGSQLE IFAKGVRNSV GFDWNPRTGE LWFTDNGRDW LGDDEPPDEL 240
  241 NRAPVKGMHF GFPYCHGGDI PDPEYGKLRN CSEFTPPEMK LGPHVAALGM TFYTGTMFPE 300
  301 EYRNQIFIAE HGSWNRKIPI GYRVSLVRLE NGKPVSYEPF ANGWLQGLAA WGRPVDVLVM 360
  361 PDGALLVSDD KNNAIYRISY S

Type	Start	End	Confidence
Signal Peptide	1	22	0.96
N-region	1	13
H-region	14	19
C-region	20	22
Cleavage Site	22	23
Non-Cytoplasmic	23	381	0.99