YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|72397200, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRKELIVLLV ILGVFLAIGC TGNGNEATNE TDNSVVAETS SSEQNPDAIT VSAAASLTEA  60
   61 FTDIESQFET ENPDVDVNFN FAGSGNLRQQ IEGGAPVDVF ASANQNHMDI LAGEKLIENS 120
  121 TRKDFAQNSL VLIVPTNSDL NITGIKDLTA PEVEKISIGN PETAPVGKYA TQALTEAGIW 180
  181 DQIKDKTILA EDVKQVLTYV ERGEVDAGFV YMTDAKTADP GTIKIVATVP VNTSISYPIA 240
  241 VVSDSDNKEE AQEFVDFITG DEGQEILEKY GFTPESE

Type	Start	End	Confidence
Signal Peptide	1	22	0.98
N-region	1	13
H-region	14	19
C-region	20	22
Cleavage Site	22	23
Non-Cytoplasmic	23	277	0.99