YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|68246653, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.97
Topology Confidence:	0.60
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAEEGTQEQE GGGGGGLMKI IIPVVALLIG VGGGYFLGDM LASKSVEEQK QAEPTETKKP  60
   61 EDIRAMVGDV FPLEDFLVNL NEGRGNRYLK ATIELELDTE ELRPEVERRQ PQIRDVILSL 120
  121 LGSKSAKELM DSEGKFRLRE EILSRINAVL VNGNVKRVYF TAFVIQ

Type	Start	End	Confidence
Non-Cytoplasmic	1	16	0.61
Transmembrane Helix	17	38	0.87
Cytoplasmic	39	166	0.60