YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|32128440, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.83
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSTLNFISTY GSVLITSLAI LVAGITLVLR VQELIYKYRK ERKRIKMSES AKQQDWAWKI  60
   61 IALGGLGLSA AGVVAISSHE GLRYTAYPDP ATKAAPWTIC YGHTGPEVRP GLVVTQSQCD 120
  121 KWLAQDLSKA EQQVRAVVKV RITQGEMDAY TSFVYNAGIG NFRGSTMLKL LNQGKRKEAC 180
  181 DQFPRWSYAN KIRLEGLAKR RYEERAMCLK GGKYVNAAIM ETH

Type	Start	End	Confidence
Non-Cytoplasmic	1	11	0.83
Transmembrane Helix	12	34	0.89
Cytoplasmic	35	55	0.92
Transmembrane Helix	56	76	0.94
Non-Cytoplasmic	77	223	0.93