YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|15209179
Protein type:	Transmembrane
Type Confidence:	0.96
Topology Confidence:	0.82
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDSKGAAPNQ TYEDFVPTTE LVQEQDSDTL LIDLTGFKKE QVRIQLTRTG VLKISGQRPV  60
   61 AESKWLRFQK DFPVSQNCDK TKISAKFENG ILHVKQPKLI TSSENKGQEL PTSDAQRQQK 120
  121 LADEPQPTPQ KKNEEQTKDE KTPSPTEELP KHQATNADKP EMEEPNTKEA KDLVEKTPAE 180
  181 NTGATSTVED ENRPSYACRL DKDAFIGTAA VLAEKLKMPR KLMNMTLIAL LVLGIGLYIS 240
  241 NKMKSNN

Type	Start	End	Confidence
Cytoplasmic	1	221	0.88
Transmembrane Helix	222	240	0.92
Non-Cytoplasmic	241	247	0.82