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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|113549476, gi...
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPGLHVVSFL VVLLLQLRSS GMHLVASELF WGNTLPNGDI YVGSFDGLVP HGPGKYMWTD  60
   61 GALYDGEWDK SKMTGRGLIQ WPSGASYEGD FRGGFIDGAG TFKGVDGSVY KGSWRMNKKH 120
  121 GMGTMVYSNS DTYEGFWNEG LPDEFGKYTW ADGNVYIGRW KSGKMNGSGV MQWINGDTLD 180
  181 CNWLNGLAHG KGYCKYASGA CYIGTWDRGL KDGHGTFYQP GSKIPCNLEV SDCLTSHDGT 240
  241 SASSSSNEKI TIGLLFLLQK LCKNWRLRRF LHRPRRISNG TTPVFDDNSG SHLCQDVSSK 300
  301 SFSADDQCLQ DSEVDKDSVY EREYVQGVLI MEQPKNEDSR MSESGIAQEN NWEKQAKGPM 360
  361 ETIYKGHRSY YLMLNLQLGI RYTVGKITPV PLREVRSNDF GPRARIKMYF PCEGSQYTPP 420
  421 HYSVDFFWKD YCPMVFRNLR EMFHIDAADY MMSICGGDSL KELSSPGKSG SIFYLSQDER 480
  481 FVIKTLRKTE LKILLKMLPK YYNHVKAYDN TLITKFFGVH RITLKPGRKV RFVVMGNMFC 540
  541 TELRIHRKYD LKGSTQGRST KKQNINENTT LKDLDLSYVF HVDKPWREAL FRQIALDCMF 600
  601 LESQSIIDYS MLLGIHFRAP NHLKRITSCQ NALESTGISA ETECSVALHH EETISSKGFL 660
  661 LVAADEPGPA VRGSHIRGSM VRAAEGGYEE VDLVLPGTGR FRVQLGVNMP ARARKVQEDV 720
  721 NVEVENRDTI EEYDVVLYLG IIDILQEYNV SKRVEHAVKS LKFDPLSISA VDPNLYSRRF 780
  781 ISFLEKVFPE QD

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle