YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|68195629, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.74
Topology Confidence:	0.60
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTEELQCIGC GAVIQTNKPG ELGYTPQTAL EKGLASGEVY CQRCFRLRHY NEIQDVSLTD  60
   61 DDFLRLLNEL GQKDALIVNV VDIFDFNGSL IPGLHRFVGD NPVLLVGNKV DILPKSLKKT 120
  121 KLTQWMKERA YEAGIRPVDV LLTSAKKSHE MTELLEKIEE YRDGRDVYIV GVTNVGKSTL 180
  181 INQIIKNTAG VQDVITTSQF PGTTLDKIEI PLDDGHFLID TPGIIHRHQM AHYLGKKDLR 240
  241 IIAPLKEIKP KVYQLNEGQT LFLGGLARFD FISGNRASFI AYVSNDVNIH RTKLEKADEF 300
  301 YQKHVGGLLQ PPRPDEVEAF PELVRFEFSV KEKTDIVFAG LGWITVTAPV VIAGWAPKGV 360
  361 DVLKRKALI

Type	Start	End	Confidence
Non-Cytoplasmic	1	335	0.92
Transmembrane Helix	336	356	0.70
Cytoplasmic	357	369	0.60