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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|48824858
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.68
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNIKDLMVKE AMIMDLQATD KKGAIDEMVQ KMFDAGRISD IETYKEGILA REAQTSTGLG  60
   61 DGIAMPHAKN SAVKEATVLF AKSQKGVDYE ALDGQPTYLF FMIAAPEGAN DTHLQALAAL 120
  121 SRLLIDADFV GKLKEANTPE EVQDLFQTAE EQKEAEEKAE QETQAAEASA HPERKFVVAV 180
  181 TACPTGIAHT YMAEDALKKK AKEMGVEIKV ETNGSEGIKN RLTAEDIARA EGVIVAADKK 240
  241 VEMNRFDGKE LINRPVSDGI RKPEELINLA LSGTAPVFHG DGKESSSEEG NADGTIGQRI 300
  301 YKDLMNGVSH MLPFVIGGGI AIALSFMIDQ FIGVPHDQLS NLGNYNQAAS WFNQIGQAAF 360
  361 GFMLPVLAGF IASSIGDRPG LIVGFAAGAL ANTGGAGFLG ALIGGFLAGY VIVFLRKLFK 420
  421 NLPKSLDGIK TILFYPVFGL LITGFLMLLV NVPMKAINDA LNGFLTSMSG SNAALLGALL 480
  481 AGMMAADLGG PINKAAYVFG TATLATTVAT GGSVVMASVM AGGMVPPLAI FVATRLFKNK 540
  541 FSKTDQDAGL TNIVMGLSFV TEGSIPFAAA DPIRAIPSFI IGSALTGGLV GAFGIKLLAP 600
  601 HGGIFVVFLL SHPVMYLVFI AIGAVVSGVI YGLLRKAPAV AEA

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle