YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|91780143, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.87
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPTKPVVPAP TDELDTVPDT SSPAYATHHP LTRAFDRFAS LVTRWAGSPA AFCLAVLTVL  60
   61 AWVVTGPIFH YSEGWQLVIN TGTTIITFLM VFLIQQSQNK DSVALHLKLN ELLSSHRAAS 120
  121 NHLIGIEDAS EEELRRLAAA YLRLSTKPDT GTAAGGSLTP ERTGPPTDS

Type	Start	End	Confidence
Cytoplasmic	1	41	0.96
Transmembrane Helix	42	65	0.87
Non-Cytoplasmic	66	74	0.75
Transmembrane Helix	75	94	0.93
Cytoplasmic	95	169	0.94