YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|91690224, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKMKVKTTGW TKASHRFLAV ACLAGLQAAP AAYASDIDFA APLNGWRNTS GDSERYTQDV  60
   61 HYPAVSVSTP EGQSRFALIE GQIRNAPKKK GTTVGTLVVD GTPLPQRVEE DGKFSRPYAF 120
  121 PAGSNGVELR APDGSRKRVQ FYDAYSGKTQ PKLRVLLAWD TDGTDLDLHV VSPDGAHTWY 180
  181 GERVAPNGGA LDVDVTTGYG PEIYSSAAPL KGTYLVYVNY YGSGNSGADM TVAQVTIITN 240
  241 ENTPNEKSET IRVPMRKAGE LTLVKTFVLP

Type	Start	End	Confidence
Signal Peptide	1	34	0.98
N-region	1	25
H-region	26	31
C-region	32	34
Cleavage Site	34	35
Non-Cytoplasmic	35	270	0.99