YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|37911268
Protein type:	Globular with Signal Peptide
Type Confidence:	0.86
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMKRLSSSDS VGGLISLCPT TSTDQPSPRR YGREFQSMLE GYEEEEEEAI TEERGQTGLA  60
   61 EKKRRLSINQ VKALEKNFEL ENKLEPERKV KLAQELGLQP RQVAVWFQNR RARWKTKQLE 120
  121 KDYGVLKTQY DSLRHNFDSL RRDNESLLQE IGKLKAKLNG EEEVEEDDED EENNAVTMES 180
  181 DVSVKEEEVS LPEELTDPPS SPPQLLEHSD SFNYRSFTDL RDLLPLKAAA SSVAAAGSSD 240
  241 SSDSSAVLNE ESSSNVTAAP ATVPRGSFLQ FVKMEQTEDH DDFLSGEEAC GFFSDEQPPS 300
  301 LHWYSTVDQW N

Type	Start	End	Confidence
Signal Peptide	1	23	0.86
N-region	1	14
H-region	15	20
C-region	21	23
Cleavage Site	23	24
Non-Cytoplasmic	24	311	0.99