YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|48768392, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.92
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKPTSATAHE SSHGSIRSHL IGYGLSVVLT LVSFGAVMSG VLPPGYGLAV IVLLCIAQLL  60
   61 VQLVFFLHLG PRKGQRGNTA IFACTVFLIA IVVSGSLWVM HNANLNMMPM QSMPLQASPK 120
  121 G

Type	Start	End	Confidence
Cytoplasmic	1	19	0.95
Transmembrane Helix	20	40	0.94
Non-Cytoplasmic	41	46	0.76
Transmembrane Helix	47	69	0.92
Cytoplasmic	70	78	0.89
Transmembrane Helix	79	101	0.93
Non-Cytoplasmic	102	121	0.97