YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|48763598
Protein type:	Transmembrane
Type Confidence:	0.97
Topology Confidence:	0.65
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAEAEHTAST PGGESSRRDF LIYGTTAVGA VGVALAVWPF IDFMNPAADT LALASTEVDV  60
   61 SAIAEGQAIT VTWRGKPVFV RHRTQKEIDE ARAVDPATLR DPQTDEARVQ QAQWLVMVGV 120
  121 CTHLGCIPLG QKAGDPKGDF DGWFCPCHGS HYDSAGRIRK GPAPLNLPVP PYAFTDDTTV 180
  181 LIG

Type	Start	End	Confidence
Cytoplasmic	1	19	0.89
Transmembrane Helix	20	41	0.92
Non-Cytoplasmic	42	183	0.65