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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|48731218, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.77
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNDLANSKMT TNPPKRIDFN TPELQRKRRI RALKDRFTRW YVLVGGLAVL AAITLIFFFL  60
   61 AYVVAPLFKG ADLTAKDAIT PAWMQDAGKP LMISLEEQNQ VAMRVSDKGQ ALFFDIDSGA 120
  121 ELKRVDLPLP AGASVTSIGE DQPGHPLVAV GLSNGQALVF RHTYKVSYPD GKKTITPAIE 180
  181 YPYGETPIAL NESGGALEHV SLNATDSTLM LVGSTGSQLN VLSLTSEENM MTGEVTNEQK 240
  241 RIDLPQMTEP VKNIFVDPRQ QWLYVVNGRA QADVFSLRDK SLNGRYKLLE NADAEVTAAT 300
  301 QLVGGISLIV GDSKGGLAQW FMARDTDGEL RLKQIRTFQM GTTPIVEISA EERRKGFLAL 360
  361 DASGKLGVFH STAHRTLLVD QVVEGQGLFG LSPRANRVIV EAGGKLQPLL LDNPHPEVSW 420
  421 SALWSKVWYE NYDEPKYVWQ STAANTDFEP KLSLSPLTFG TLKAAFYAML LAAPLAVAAA 480
  481 IYTAYFMAPG MRRKVKPVIE LMEAMPTVIL GFFAGLFLAP YVEGHLPGIF SLLMLLPIGI 540
  541 LIAGFTFSRL PESIRLKVPD GWESALLIPV ILFVGWLSLY MSPFMENWFF GGDMRMWISH 600
  601 DLGITYDQRN ALVVGLAMGF AVIPNIYSIA EDAVFSVPRG LTLGSLALGA TPWQTMTRVV 660
  661 ILTASPGIFS ALMIGMGRAV GETMIVLMAT GNTPVMEMNL FEGLRTLAAN VAVEMPESEV 720
  721 GGSHYRVLFL SALVLLLFTF VMNTLAELIR QRLRKKYSSL 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle