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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|77383995, gi|...
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.42
Topology Confidence: 0.49
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSLRQLSIQW KITLLAGLCL AGIVTLLVGL SLYRMEHSSE LVKASSMEML TESAQARIES  60
   61 QGEVQAAGIR QQFMDAYQYG HGFSRQVLFL REQAEKRFLD AFDLREDMTR QVKSALQANP 120
  121 DLLGLSLVFE ANALDGKDEL FAGQAELGSN DKGRFALYWS QPTPGKVTSM ALPESDMADT 180
  181 STGPSGQAAN AWFTCPRTTL KPCVIEPYFY VIDGQKVLMT SIVFPLMVNG KVIASLSVDI 240
  241 NLNSLQAISQ SASKKLYDGQ TAVSIVSPAG LLAGYSPDAN KLSQRLDAVD TTSGAELLRL 300
  301 LASNQTVSSL HSNAQLKVLS PFQPIPGGPS WGVLLDVPEK VLVERAEALK QQLDASNTSG 360
  361 TLIELSLGVL AALIGLLLVW LMARSVTKPI LGVAHMLEDI ASGEGDLTRR LAYDKKDELG 420
  421 QLAGWFNRFL DKLQPIIAEV KRSVQDARNT ADQSSAIATQ TSAGMEQQYR QVDQVATASH 480
  481 EMSATAQDVA RSAAQAAEAA KDADRATRQG LTVIDRTTAS IDTLAADMSA AMVQVEGLAA 540
  541 NSEKIGTVLE TIRAIAEQTN LLALNAAIEA ARAGEAGRGF AVVADEVRNL ARRTQESVEE 600
  601 TRQVIEQLQN GTQDVVGSMG NSHRQAQGSV EQVGQAVTAL RQIGDAVTVI SDMNLQIASA 660
  661 AEEQSAVAEE INNNVATIRD VTESLSGQAN ESARVSQSLN SLANQQQSLM DQFRV

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle