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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|50604627
Protein type: Transmembrane
Type Confidence: 0.74
Topology Confidence: 0.62
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 VDFQQYVRTL PTNTLMGFGA FAALTTFWYA TRPRALKPPC DLAMQSVEVA GSDGARRSAI  60
   61 LDSDEPLAYF YDDVRTLYEG FQRGIRVSNN GPCLGSRKPD QPYEWLSYKQ VEDMSECVGS 120
  121 ALIHKGFKAG PENFVGIFAQ NRPEWVIIEQ GCFAYSMVVV PLYDTLGTEA ITYIINKGEL 180
  181 SLVFVDKPEK ANLLLEGVEN KLIPGLKTII LMDSYGIDLL ERGKKCGVEI MSMKALEDLG 240
  241 RANRRKPKPP APEDLAVICF TSGTTGNPKG AMITHRNVVS DCSAFVKVTD KTFSPSSDDT 300
  301 LISFLPLAHM FERVVECVML CHGAKIGFFQ GDIRLLMDDL KALQPTIFPV VPRLLNRMFD 360
  361 RIFGQANTTL KRWLLDFASK RKEAELRSGI IRNNSLWDKL IFHKIQSSLG GKVRLMVTGA 420
  421 APVSATVLTF LRAALGCQFY EGYGQTECTA GCSLTVPGDW TAGHVGAPMP CSLIKLVDVE 480
  481 EMNYLAAKGE GEVCVKGPNV FQGYLKDPAK TAEALDKDGW LHTGDIGKWL PNGTLKIIDR 540
  541 KKHIFKLAQG EYIAPEKIEN IYLRSEPVAQ VFVHGESLQA FLIAIVVPDV ETLGHWAQKR 600
  601 GFVGSFEELC RNKDVKKAIL EDMLRLGRDA GLKSFEQVRG ISLHPELFSI DNGLLTPTMK 660
  661 AKRPELRNYF RSQIDELYST VKV

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle