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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|48728977, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.95
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSQPIRIKDH EKDARLVRGR VVFGAIAVVA LICVLIARLY YLQVIQYEYH STLSENNRVH  60
   61 VQPIPPTRGL IFDRNGVVVA DNRPSFSLSM TRERSGDWQQ VLDVIVEVLE LTPEDRVIFE 120
  121 KRMRQGRRPF EPVPILFELT EEQIARIAVN QFRLPGVEVV AQLVRHYPQG AHFAHSVGYM 180
  181 GRINEKELKT LDPVNYSGTH HIGKTGIERF YEAELHGQVG YEEVETNARG RVLRVLKRTD 240
  241 PVPGKDIVLS LDIKLQEAAE AALGGRRGAV VALDPKTGEV LAMVSQPSFD PNLFVTGISF 300
  301 KAYAELRDSI DRPLFNRVLR GLYPPGSTIK PAVAIAGLDA GVVTASSRVF DPGYYMLPNY 360
  361 DHKYRNWNRT GDGFVDLDTA IMRSNDTYFY DLAHKLGIDR LSAYMNKFGI GQKVSLDMFE 420
  421 ESPGLMPSRE WKRATRRQAW FPGETLILGI GQGYMQSTPL QLAQATALVA NKGVWNRPHL 480
  481 AKTIEGEKPK DENPMPDIIL RDPSDWNKVN HGMQQVMHGA RGTARKASIG AQYRIAGKSG 540
  541 TAQVVAIKQG EKYDRSKVQE RHRDHALFVG FAPADDPKIV VSVMVENGES GSGVAAPVVR 600
  601 QVMDAWLLDQ DGRLKAEYAS PISAEATARD E

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle