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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|47570652, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.54
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSKWQSKEQL IQLLSGLVEI PSITGTEAEV ILPDFVVEQL SDLQYFKENP HHLQKNPTGD  60
   61 GRYFVTALVK KSDSTKNTVV LVSHFDVVDV QDYGVWKEDA FNPKKLTSMF YSHKDELPAH 120
  121 VREDLEHGDW LFGRGTMDMK CGLALQMAMI EQACEGRFDG NVLLLAVPDE EVNSVGMRAA 180
  181 VPRLLELARE HDLEYKTVLN SEPMFSRHPG DQKKYIYTGS IGKVLPGFLC YGKETHVGEP 240
  241 FAGLNGIYMA SLITAELELN TDLCDIVEGE ASPPPTNLLQ RDLKEDYSVQ IPHRAVTLFN 300
  301 LFLLEKSMTD VVSLLRQKVT KVAEKIEESY EKHAYRFSKY NPFIPPNLKV NVLTYEELIA 360
  361 YAIEQHGQEK INEIQSSIIK NREDKDDRAV TIDLVDKLAI LCKEKAPMIV LFFAPPYYPA 420
  421 VSSRNNQLIK EVVGEMEKYA NFNHNISFEN QNYFGGISDL SYVGLQNPLD SMSSLVDNMP 480
  481 LWDKGYSIPL QELEEFDVPV LNMGPVGKDA HQWTERLDVN YAFETLLDML PICIEKLLVS 540
  541 NKITQV

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle