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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|47570560, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKKKMKKFTA VVAPVLAMSM ALTACSGSGG EKKTTTTSNN GGEEKKSDIK YAAKQVLNRT  60
   61 ETQEIPTMDT SKSTDVVGAQ ILGNTMEGLY RLDKDNKPIP AAAESSTKSE DGKKYTFKLR 120
  121 KDATWSNGDP VTAKDFVYAW QRLLDKNTAS EYAFIAYYIK NAEVINKGEK PVTDLGVKAI 180
  181 DDYTLEVELE KPVPYFLNLT AFPSYYPLNE KFVKEKGDKF GLEADTTLYN GPFVMASWKH 240
  241 EQGWQLKKND KYWDKKTVKL EEINYSVVKE VATRVNLYDT DSLDFALLSG EFVDKYKSNK 300
  301 GEYGEYSEAS TFFLRLNQKR NGQDTPLKSK KLREAIALSI DKKGLANVIL NNGSKATDQL 360
  361 VPKGLATGPD GKDFQDTFKN GLKYNPKKGA AAWEEAKKEL GKDQVTIELL SYDDGTAKKI 420
  421 ADYFKDQIEK NLKGVTINTK IQPFKQKLKL ESAQDYEISY GGWSPDYADP MTFIDMFESK 480
  481 SPNNQMSYSN SKYDEMVEKA GNELLSDTKK RWETLGKAEK LLLEEDAGMV PLYQTGRAYV 540
  541 MKPNVKGIVK HNISPEYSFK WAYITEKDSK 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle