YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|47552975, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.88
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDQTMNPKLK KYKRLFFTVM FSSVLFFVFS FFVIIIVAKI MGPPPVAVSQ TSVFYANDDT  60
   61 VIGQSNEVQK RYNVSLNEIS PYVKEATLSI EDQRFYKHHG FDMKRIAGAI VADLKAMAKV 120
  121 QGASTITQQY ARNLYLDHDK TWKRKLLEAM YTIRLEVNYN KNHILEGYLN TIYYGHGAYG 180
  181 IEAASRLYFD KTAKELTLAE ASMLAGIPKG PSVYSPFLKE DRAKERQSLI LDEMVEQGYI 240
  241 TKKQAASAKK ESLTFASLDT KKVAEVAPYF QDAVQASLLR DIGLDEQALQ KGGLRIYTTL 300
  301 DPKLQSVAEQ AVKDHIPDTT NIQTALVSMN PKTGEVAALV GGTDYNTSQF NRATQAARQP 360
  361 GSTFKPFLYY AALERGFTPA TRLKSEYTVF TLGDGVSKYK PKNYKDYYAD DFVTMAQALA 420
  421 VSDNVYAVKT NLFLGEDILT KTAKQFGIKS ALKDVPSLAL GTSPVKPIEM VNAYSMFANG 480
  481 GKEVKPIFIR RIMDHEGNML YDAHLESKQI LDKSKAFVME EMMTGMFNKK LSSYAAVTGQ 540
  541 SMLSKLSRTY AGKSGSTETD SWMIGFTPQI VTGVWVGYDQ PKSISNVAEQ GYAKRIWTDT 600
  601 MEKGLDGQPK KEFKQPSDVV AVDINPENGK IATKNCPISV KMYFAKGTEP TEYCMDHVDD 660
  661 NEEFEKTTEE KKKTSWWKKY LPW

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle