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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|47569858, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIKRLINKSV LLLTIIVMFA SVFSIQSVKA VSNSKTTEVI IHYKEQLGNT KDWNLWLWGE  60
   61 NANGTSYEFT GEDEFGKYAK INIDGDYNRV GFIIRTNEWE KDGGDRWIEN IKDGRAEVWI 120
  121 LSGDEKVYNA KPSSDLSIQK ATIDSFNEIT VTTNVPFHIK EQKIEIEGIK IKNISPYDIN 180
  181 SGNVTNKVKI ITEQKIDLKQ TYKVKIENLA DTNTEIGKVI RSEEFDHSFY YGGNDLGNIY 240
  241 TPQHTKFRVW APTASEAKLV TYKKWNDKIG TEINMQQGEK GTWKAELKGN QEGLYYTYKV 300
  301 KIGDKWTEAV DPYARAASVN GDKGAVVDLE ETNPKKWNTN KKPKLKNPED AIIYELHVRD 360
  361 LSIQPESGIK QKGKYLGVTE KGTRGPEGVK TGLDHMKDLG VTHVQLLPIF DYASVNEENV 420
  421 NEPQYNWGYD PKNFNVPEGS YSTNPYEPTV RITELKQMIQ TLHDNNLRVV MDVVYNHMYN 480
  481 ATESNFHKLV PGYYYRYNED GTFANGTGVG NDTASERKMM RKFMIDSITY WAKEYNLDGF 540
  541 RFDLMGIHDY ETMNEIRKAV NQIDPSIILH GEGWDLNTPL AAELKANQKN AEKMKGIAHF 600
  601 NDNIRDGLKG SVFEEKENGF VNGKANMEDR IKKGITAGIN YDKNTSTYQD PEQVLTYVEA 660
  661 HDNHTLWDKL ELTNPSDSEE VRKQMHKLSS SILLTSQGIP FLHAGQEFMR TKYGDHNSYK 720
  721 SPDSINQMDW LRRATFNNEV DYMKGLIELR KKYSAFRMTS AEQIKTHISF IDAPKNTVAY 780
  781 TIEGNKNEYF TVAHNANREA VEITLPSKGP WKVLVDGKQA GSKPLSVVHD NKIKVPALSS 840
  841 FVLKTEKPIK 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle