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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|47553726, gi|...
Protein type: Transmembrane
Type Confidence: 0.91
Topology Confidence: 0.80
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MHKLQTNKGT RYFMIAFIVL FLIMLLRFFY IQAVGVVHNV DVKDLAIEQH NKKGVLEANR  60
   61 GTIYDQTGKV LVQDSTTYRV VVNLKGNDKL KNKDETAEQL ATALEIDKED VLKNFHEGRT 120
  121 QVEIGKAGRN LSREKKEQIK KMKIPGVSFM PEKARVYPNE DFASYILGFA RPDDKGNTEG 180
  181 KFGLEKSLDK YLRSTNGNIE YVGARGGIPL TNDIGKIEPA KHGNNVYLTL DKQINSFLEE 240
  241 AMNKAQEHYD PSMLVGIIAD PKTGKILAMS SKPSFNPNKG DIEYFLNDPI ANAYEPGSTM 300
  301 KIFTLAAAIN EGVYNGKEYF QSGKYSVGSS DIKDHNGGFG WGSITFDEGF ERSSNVAFSI 360
  361 LEDQLLKPNK FKQYMNKFGF NQKTGIDLPG ESKNTLLLNT QIQQVTTSFG QGSTVTPIQL 420
  421 IQAASAIAND GKMMQPYIVD KVVNPTNKQV IMENQPKEIG NPIKKETADK VRDLMERVIT 480
  481 SSKGTGTMYK VDGYPIGGKT GTAQIPNPEN GRYMEGKENY IFSFLGMAPI DDPELIVYLA 540
  541 IKQPKLKGDE YGAQPLAEIF KPVVKNSLEY LKVKPYTEKQ MADATKKSQL KVQNYVNQSM 600
  601 DTVENNVKKE KLQPITLGEG KIIKQYPQSG EVMSEGDRIF LLGNNAIMPN LQGWSMRDVM 660
  661 YFSKLLKLDL KTSGTGYVTN QSIEKGQSIQ KGDALELELE PPLQPLAEAN TN

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle