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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|47554218, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.87
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLKEIKCECG HVNPIGTVFC EACGKPFESN ENIKLLDMRY EGSARRSLTQ TKTIVDKIWS  60
   61 FFSSVKVGVW LIVITLAASA IGTIFPQEMY ITPGIAPAEY YKQEYGFLGQ LYYQLGFNNL 120
  121 YGSWWYMMLI ASIGISLVIC SLDRVIPLYK ALKKQGVKRH PSFLKRQRLY GTGTPQDGDL 180
  181 ERVQMNLKKT NYNVKVEDGN VLAEKGRFSR WGPYVNHIGL IIFLFGAMLR FLPSMYVDEA 240
  241 LWLRDGETKE IPGTDGQYYL KNEKFIKEVY DKSKDKEVFD EAIDRVGDKM IAKNFQTNAV 300
  301 LYKAVGESIA GQKPKLEKVK EAEIRVNEPL KFDQFAVYQL DYKENEFKSM SFNLQNKENN 360
  361 QKWGPIKVDL TDPKEKYDLG NGYSLELLSY FPDFYFDENG KPNTKTKLPN NPAFVFKMFT 420
  421 PETPGGEVSF VGIQQNIEPD GNNKYKMSFA GVEMQNATAL TVRKDLTLWI LGIGGFIFMV 480
  481 GVIQGMYWNH RRIWIQRVND EWWIAGHTNK NWFGLKKDIE RVLEGTAIPQ PNDKVVDKKI 540
  541 S

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle