YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|47569051, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRKKIWLICL ALFITMIFTS CNATNANSKG KIKLGVTSWK ENIATANMWK VLLEQKGYKV  60
   61 ELMYLEKAAI WTGVARGDVD ANLEVWLPVT DKPLNDRYKD DIVLKSKWYE GTGLGLVVPS 120
  121 YMKNINNIED LNAHKDELDN KIVGIEPGSS LMNLTNKAMK EYDIKLKLVQ SSEAAMMSEL 180
  181 KKAYTKKKPI AVTLWNPHWG FSEFDLKYLK DPKKVYGEKD DIYYSVRKGF EKDHPDIIKY 240
  241 FDKWKINDEQ LGTLMVELNK TKDPEEAARK WIKNNQALVD EWVKD

Type	Start	End	Confidence
Signal Peptide	1	23	0.99
N-region	1	14
H-region	15	20
C-region	21	23
Cleavage Site	23	24
Non-Cytoplasmic	24	285	0.99