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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|221238467, gi...
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTNKPKFFKV LSTLAVSTLL LSACGGSGGS EKTSSTKKVD TNKFSASVKN DKKEIKDGSL  60
   61 TYGLVSNTPF EGLLNFAVYE GDPDNQVITI FDESLLSNDE NWEYTNDGAA TYEISKDKKT 120
  121 ITLKIKDNVK WHDGNPVTAE DLEYSYLVIG SKKYAGSRYD TQMQMIEGME DYHNGKAEKI 180
  181 SGIKVTDPKT ISITFKTPNP SVKTGLWTYP LHKKYLGDVP IDKLAESDKI RKNPIGFGPF 240
  241 KVKKITPGEA VEFERFDDYY GGKPKLKSMV LKVVNPSVVN ASLKNGDIDI AEVSADQYPN 300
  301 VSKLKNAQLV GKTDLYYSYI GFKLGHMDKE KEEVVMDKEK FKDVRVRQAM AYAIDRKEIG 360
  361 EKLYHGLRYP ANSPIPPSLP KYHNNKAGSY DKDVEKAKKL LDEAGYKDTN GDGFREDPNG 420
  421 KEFKANFLSM SGSDVSEPLA KFFIQSWKDI GLKVELLDGR LHEFNSFYDM IKKDDPKVDL 480
  481 FAAAWGTGSD PDPSGIWAKD AAFNYPRWAT DKNTELLKQG ISPEAADEKY RKDVYDKWQK 540
  541 LVHDEVPLIP LHYKFDLKGV NNRVKDYKYT PEDQYKWGKV SVTSDKAETE K

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle