YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|47568059, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNFMRKKPFT VFVFLLAFSL LLSACGKPNT KEDTKEDTKK EMITVEHAMG KTEVPANPKR  60
   61 VVILTNEGTE ALLELGVKPV GAVKSWTGDP WYPHIKDKMK DVKVVGDEGQ VNVETIASLK 120
  121 PDLIIGNKMR HEKVYEQLKA IAPTVFSETL RGEWKDNFKF YAKALNKEKE GEKVLADYDK 180
  181 RMKDLRTKLG DKVNQEISMV RFMPGDVRIY HGDTFSGVIL KELGFKRPGD QNKDDFAERN 240
  241 VSKERISAMD GDVLFYFTFD KGNEKKGSEL EKEYINDPLF KNLNAVKNNK AYKVDDVIWN 300
  301 TAGGVMAANL LLDDIEKRFV K

Type	Start	End	Confidence
Signal Peptide	1	26	0.99
N-region	1	17
H-region	18	23
C-region	24	26
Cleavage Site	26	27
Non-Cytoplasmic	27	321	0.99