YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|47564986, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.87
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLKRFKFYLI SGIVLVLLIV CNFVDKPIAK VGEVKDTVMM KLHTKESMAQ IDGQTIYFKQ  60
   61 IGEGKPPLLM LHGFGGSSDG FSDIYPELAR DHTIIAVDIL GFGRSSKPVD FQYSFPAQVN 120
  121 LYYKLMKKLG YDQFAVLGHS MGGEMSLNLA YLYPDAVTHL ILADSTGIES FQQKESYEVP 180
  181 PLSTDLQTVT EITDYNKNAV KNSRDDKEHY DQLTKMRERR IAMEADKIKV PTLIIWGRHD 240
  241 KSVSWKNGEL YHELFANSTF HIIEKGYHAP FRQEPIEFME YVQAFFAKHP Q

Type	Start	End	Confidence
Signal Peptide	1	23	0.85
N-region	1	14
H-region	15	20
C-region	21	23
Cleavage Site	23	24
Non-Cytoplasmic	24	291	0.98