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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|47564942, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.98
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MYIKLLKSIT SLSLIGGALL YTNGSDVKAA EAGIFSDVPT SHWSYPAIKD LSSKNIISGY  60
   61 GNGKFGFGDV ATREQVAALI YRALLPNKQG GAFSNEGARY VLKDGSALNN PYRDIRSGST 120
  121 LFPEEILTLT KLGIFNGDGN GGFRPKDSVS RAEMAQIIKN AFQVSAKQKH TFNDVPDGFW 180
  181 AEGAISAVQS NGIASGTGDG KFEPAKTVTR EQYAQFLYNA LQYKKPAVAV KNTGDAALLA 240
  241 AFKDEVQKRI NAYETNITLS YKTKNGNQEE VMKTLFNAYK EVASKNEYTN YNRSNVSYGI 300
  301 SGSPGNYTFT LKITYRETKE QTEYVMKQAK AIVSSVTKVG MDDHEKVKAI HDYVVKHISY 360
  361 DTSYRAYTAY EALVNRSAVC QGYALLTYQL LKEAGIENHF VVGTGDGQPH AWNLVKIENK 420
  421 WYHLDTTFDD PVPDEQGRVT YSYFNLSDEQ IARNHEWNRG DYPQATTNYY STLTNKIATG 480
  481 STKTPAYQQI LKDTKLNYLG NEYIANNYNE FKNKMQQRYN AKSAKIEILY KQSMNGALQD 540
  541 VKKVIGEIGY PQGASRVSYR AEPYNAKEGY SLVTITFTY

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle