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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|47558210, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAKTNSYKKV IAGTMTAAMV AGVVSPVAAA GKSFPDVPAG HWGLDSINYL VDKGAIEGKP  60
   61 DGTYAPAEEI DRASAAKIMA ITLGLKVEEG AQPSFKDAKN HWASKYIAAV EKAGVVRGDG 120
  121 KENFSPDKKI DRASFASMIV GAYNLKDKVN GELVTKFEDL LDHWGEEKAN ILIHLGLSEG 180
  181 TGGNKWEPNK SVSRAEAAKF IAVADKKYGK KDNAQANVTD VKVSEPTKLT LTGTGLDKLA 240
  241 ADDVTLEGDK AVAIEASADG TSAVVTLGGK VAPNKNLTVK VKNQSFVTKF VYEVKKLAVE 300
  301 KLTFDDDRAG QSVVFKLNDE KGNADVEYLN LADHDVKFVA NNLDGSPAYI FENGEATSST 360
  361 GKLGVGLSHG DYKVEVQVTK RGGLTVSNTG IISVKNLDTP ASAIKNTVFA VDADKNGVVY 420
  421 GNKLTGKDFK LNSQTLVVGE KAQIHNVVAT IAGEDKVVDP NSISIKSSNH GIISVVNNYI 480
  481 TAEAAGEATL TIKVGDVTKD VKFKVTTDSR KLVSVKANPD KLQVVQNKTL PVTFVTTDQY 540
  541 GDPFGANTTA IKEVLPKTGV VAEGGLDVVT TDSGSIGTKT IGVTGNDVGE GTVHFQNANG 600
  601 ETLGSLYVNV TEGNVAFKNF ELVSKVGQYG ASPDTKLDLN VSNTVAYQLS KYTSDRVYSD 660
  661 PENLEGYVVE SKNPAVAEAK IVGNKVVVKG LKPGKVDIHL TKNGATAGKA TIEIVQEKIA 720
  721 IKSVNFKPVQ TENFVEKKIN IGTVLELEKS NLDDIVKGIN LTKETQHKVR VVKSGENQGK 780
  781 LYLDTNGNAH FDLFDQELGH VTVSQTSDSA LPNFNPDIYN TLTTKYTDKG TLVFKVLGEK 840
  841 DVLTSEIGSQ AVHVNVLNNP NL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle