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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|47558209, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAKTNSYKKV IAGTMTAAMV AGVVSPVAAA GKTFPDVQPG SWSAEYIDYL VAKKAIEGKP  60
   61 DGTFAPTEAI DRASAAKIMA ITLGLEVKDG AKPTFKDAQD SWAAKYIAAV EKAGVIQGDG 120
  121 TGNFNPNNQI NRASMASMIV KAYKLDGKVS GQLETKFFDL KDHWGEKDAN ILVALGITNG 180
  181 TGNGWEPDKS VTRAEAAKFI AKTDKEFGTE AVKVESAKAV TTQKVEVKFS KAVEKLTKED 240
  241 VKVTNKANND KVLVKELTLS EDKKSATVEL YGNLAAKQTY TVDVNKVGKT EVAVGSLEAK 300
  301 TIEMADQTVV AGVDSELKYT VKDENGTEVL SPSGIEFVSP AKITDGKINL AKGTSTTVKA 360
  361 VYKKDGKVVA ESKEVKVSAE GTAVSSISNW TVVSIETKVE FDATDFKQNN KVYENDDAVL 420
  421 KVQLKDQFGT TVTKLDDVKV EFESLNTEVV VVDKATGKIT VLGTGGTAPV KVTVKDANGK 480
  481 ELATKTVEIE AFAQKEMKEI KLEKTNLTLS TKDEEGVKVK ASVLDQYGKE FADAPVKVTV 540
  541 KDKDGKEVIK QEEVASYDAK TKELTVTGKT DAGKYTVELV ATSGKKEAKA TLALELKAPG 600
  601 AFSKYEVRGL EKELDKYVTD ENQKNEMTVA VLPVDANGLV LAGKEVAKIE VTTTDKDGKE 660
  661 VPADATKVAV DEATGKIAVG AQAKAGETYK VAVKLTDGKL ITTHSFKVVD TAPASKELAV 720
  721 EFTSTSLKEV APNADLKAAL LKNLSVDGVP ATEANATVTD IDFVSADTKV VKEDGTTTDK 780
  781 GTTSIYVRSI TVKVDNKEQK VEFDKAVQIT VSIKEAARN

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle