YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|47564707, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSRKIVVVGG VAGGASVAAR LRRLSEEDEI IMVERGEYIS FANCGLPYYI GGVITERQKL  60
   61 LVQTVERMSK RFNLDIRVLS EVVKINKEEK TITIKNVTTN ETYSEEYDIL ILSPGAKPIV 120
  121 PSIPGIEEAK ALFTLRNVPD TDRIKAYVDE QKPRHATVIG GGFIGVEMVE NLRERGIDVT 180
  181 LVEMANQVMP PIDYEMAAYV HEHMKKHNVE LVLEDGVDTL EEHGTVVRLK SGSIIETDMI 240
  241 ILAIGVQPES SLAKDAGLAL GVRGTIKVDE RFQTSDPHIY AIGDAIEVKD FVTETETMIP 300
  301 LAWPANRQGR MLADIIHGHT DSVYKGTLGT SVAKVFDLTV ASTGVNEKIL KRLNIPYEVV 360
  361 HVQANSHAGY YPNATPVLIK LIFNKDSGKI YGAQALGRDG VDKRMDVIAT AMKANLTVID 420
  421 LPDLELSYAP PYSSAKDPVN MVGYAASNIV DGFVETVQWH EIDHIVENGG YLIDVREPNE 480
  481 LKQGMIKGSI HIPLDELRDR LDEVPVDKEI YITCQLGMRG YVAARMLMEK GYKVKNVDGG 540
  541 FKLYGTVVPE RVVY

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle