YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|47564698, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.97
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKNIFLGFFI IILIFQSGCT EENIVDTQRM IHVGGFDIIK DKKFRGTILY PDYTKGVQSK  60
   61 PETQSTDAGT IETISSLLNA KSPHTIAVGQ MRVVLFGKAF GEHGLGDVIN NLQRDPNIGR 120
  121 DVQLALVDGS AEELLKHVKT NGSLYLSELL EQNIKNETIP RTALNIFLYN FYSSGCDAFL 180
  181 PYIQVSEDKS ASIKGLAFLK KDKVAMYTDR KRSFLFKLLI NPTKNGRYEV PIRQGKHKGV 240
  241 IATQNLSGNS ECSLSPNGDI PKVNIHLKLN GLIKNAPRWL DLSKSKNVTY VKRHIEKMLE 300
  301 KDLNELIKQF QENKIDPIGI REEIRSHSRK WSMKQIQDMY PNVNVAVHVK INVVQSGIGE 360
  361

Type	Start	End	Confidence
Signal Peptide	1	20	0.95
N-region	1	11
H-region	12	17
C-region	18	20
Cleavage Site	20	21
Non-Cytoplasmic	21	360	0.99