YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|47558598, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKFRNTKIAM VTLSSFFILG SASLSFTDTI HGEVASASPQ EITVKSYDDT YYNNAIGKTG  60
   61 LELKKELHNI IDEHTKLSYS AVWGALRDTD EDPNNKNNVI LLYTGRSQGK LTNGSGVDNW 120
  121 NREHVWAKSH GDFGTTAGPG TDLHHLRATD VSVNSSRGNL DFDNGGVNHS EATECKYDSD 180
  181 SWEPRDGVKG DIARMLFYMA VRYEGDNGEI DLELNEKVNN NKDPYMGKLS VLLKWNEQDP 240
  241 VDDLERKRNE VIFTKYQHNR NPFIDHPEWV NKIWN

Type	Start	End	Confidence
Signal Peptide	1	25	0.98
N-region	1	16
H-region	17	22
C-region	23	25
Cleavage Site	25	26
Non-Cytoplasmic	26	275	0.99