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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|47564406, gi|...
Protein type: Transmembrane
Type Confidence: 0.98
Topology Confidence: 0.90
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEVVIKKKRT RGKKIFIWCS GIILLLVICT AIFLNIYTLS SVPKIDGTIK LEDLQHAVQV  60
   61 KRDSKGVPHI KAENAHDLYF SQGYVQAQDR LFQMDLSRRQ ASGMLSEVVG EAAVDRDKLF 120
  121 RTLGLRRAAE ASVSQYDGEA KYALQSFADG VNAFIREAKV GKKLPVEFTI LGYEPAEWSI 180
  181 VDTLTIGKYM AFDLGGHWHG QAFRYWALKN LPKEQANELF PTYPKDAPRL LAELENTNVD 240
  241 VAQSFAKTII PPEFNGSNNW VISGEKSASG KPILADDPHL SLATPSIWYQ SKLEMKDLQV 300
  301 SGVIFAGVPG VILGHNDKIA WGVTNTGPDV QDLYIEKRNP NNENEFLYND KWEKATVVDE 360
  361 SIKVKGGKTI PYKVTVTRHG PVISEFADKG KTKTVFALKW TALEPSAELK AVLNMNKAKD 420
  421 WNEFETALQD FHTPTQNFVF ASNDGTIAYK ANGNIPVRKK GDGSLPVPGW TDEYEWEGYI 480
  481 PYDQLPKIIN PKQGFISTAN NKIVDDNYPY HISNTWAQPY RQMRIQEFLQ EKEKYTVKDL 540
  541 EELQMDQKNL YGKEFAPILL KELNKASLNE VEKEGVKQLT KWNFYDSKDE AAPLLFHLLM 600
  601 KEISNTLFSK EIPKDVMELF EGKSQVVDEL IRKEVAGEKS AWFTKYGGFT KVVHTSYENV 660
  661 MKKLQKEYGP NVVEWKWGDY HQLAFTHPIS KSSSMLALLA FNREKPVPIG GSQVTVQAAS 720
  721 YGDNGIVNHG ASWRFIIDTK DISNGYHIVG PGQSGHFRSN WYHDQIDDWV NGTYHTTTLN 780
  781 TEGIEGKVLN LEPK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle