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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|47558368, gi|...
Protein type: Transmembrane
Type Confidence: 0.96
Topology Confidence: 0.89
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRQKKEQKKQ SKKKKTHIPF RLNVLFFIVF LLFSAIIIQL GKVQIIDGET YRNEVNKKED  60
   61 VTVSTPVPRG KMFDRQGQVI VNNKPLRTVT YTKMKGVDSK EVLQVARQLA QLIEMSPEDI 120
  121 DKLTETDKKD FWMQLNEKRA AAKVTKEDES KFRKQEIEGK ELDKKVEELR RERITQEELS 180
  181 ELSKEDLEVL AIKSKMNAGY KMTPQIVKKD VSQNEYAVVS ERLASLPGVD TTVDWEREYP 240
  241 NDKILRSILG SVSTENEGLP REQLDYYLVR DYNRNDRIGK SYIEKQYEDA LHGTKEQTRN 300
  301 ITDKTGNVIR TEKVTEGKSG NNLMLTVDME LQKKVEESLE KNLRAFHSAE PMMDRAFVVM 360
  361 MNPKNGQILL MAGKKIVNKD GGMQIEDYAL GTMTSSYELG STVKGATLLA GYQTDTIKPY 420
  421 THFFDAPMYF KGSSKPKKSW KDFGDIDDLR ALQVSSNVYM FNTALKMAGI NYVPNNPLDI 480
  481 KRETFNTMRY YFRQFGLGVP TGIDLPNESI GQMGRTDNIP GFLLDYAIGQ YDTYTPLQLA 540
  541 QYMSTIANGG YRMKPQIVQE VREQPHRPED VGKVIRSIEP VILNRVDMNT SYINHVKEGF 600
  601 RRVFQENDGT GTATFKGLPY KPAGKTGTAE TVYGGESDIG RDENNNRKKC YNLTLAGYAP 660
  661 YDADPEVAFS VVVPWVNDDK SGINSAIGKE ILDAYFELKT KRSGGNPVPV EQPNKGR

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle