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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|47555742, gi|...
Protein type: Transmembrane
Type Confidence: 0.98
Topology Confidence: 0.87
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPPYLFVSII STLLKNFEDY IHKDTSFSNN KCTIIWKEGR CMKKIKWTLL GGLATLVLAI  60
   61 VLYKLIVLAG GYMMDEKQLV FHSSSRIVDQ KGKEITKLYV ENRDLVPIEQ IPKYVQQSFI 120
  121 AVEDSRFYEH QGIDYPSIFR AFYKDTLAGE KVEGGSTITQ QLVKNVFLTR EKTFTRKLKE 180
  181 VAISLQLEQK YTKQQILEMY MNHIYFGHGA YGIQAAAKLY FNKNVEDLTV EEGAMLAGLP 240
  241 KSPNGYSPYF SPEKSKERRD LVLSLMHKQG YLTAEESVRY QGKTIALYKN LDENELAYMP 300
  301 YIDMVIDEAA RLYGLSHQEV LRGGYTFVVP MDEKIQKVAY NQFQDARNFP GKEEGAQGAF 360
  361 LLMDNRTGGI KAAIGGRKYV PRGFNRVFAK RQPGSVLKPL IVYAPALETK KYNPYSLLTN 420
  421 ERHSFEGYEP RNYNREYSKE ITMYDAIVES ANVPAVSLLN ELGVEEGKQY LEKGNVHIAD 480
  481 AGLSTALGGL KNGVSTFDLV KMYRAFLANG DIIEPHVIDK VLNRHGAVIG ESPKVETKIF 540
  541 SKQTAWYMTK MLEGVVKEGT AKAGVYNGAL AGKTGTTSLP NDDNGARDMW FVGYTPNLVG 600
  601 AVWIGYDRID KEHQLQGESA SATKLFKKIL TKANVEQKEQ FMKPEGVETI GAPIRLRKIE 660
  661 DVKMKLAFSP FGLFKAKLSW TPLPDERIMY RIYRVENGIH THVGTVNGAG EYEEKFVNIF 720
  721 SKPSFYVVPY NTQTNREGEK SKVAKP

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle