YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|47555936, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.89
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRKLIYIIVG IAGILGALSR YYLGLTIHES WHHTFPLATL LINLVGCFLL ACLTTYIAKL  60
   61 NILPSDVITG IGTGFIGSFT TFSTFSVETV QLLNHSEWST AFLYVSCSIL GGLIMSGLGY 120
  121 TLGDFLIKKH LTEGDHL

Type	Start	End	Confidence
Cytoplasmic	1	4	0.91
Transmembrane Helix	5	24	0.94
Non-Cytoplasmic	25	34	0.78
Transmembrane Helix	35	57	0.90
Cytoplasmic	58	66	0.74
Transmembrane Helix	67	87	0.89
Non-Cytoplasmic	88	100	0.84
Transmembrane Helix	101	122	0.95
Cytoplasmic	123	137	0.92